Plot velocity boxplots registered on apv
Source:R/growthfd.plot.RegVelocities.R
growthfd.plot.RegVelocities.RdThis function plots boxplots in time of measurements, after registration of the individual on population apv.
Arguments
- populationData
Data frame for population box plots
- individualData
Data frame for the individual
Examples
filename <- system.file("extdata", "data.csv", package="growthfd", mustWork=TRUE)
csv <- read.csv(filename)
d <- data.frame('id'=as.factor(csv[,'id']), 'x'=csv[,'age'], 'y'=csv[,'height'])
m <- d$id == 'John'
fit <- growthfd.fit(model.bgs.m, age=d$x[m], height=d$y[m])
#> It. 0, RSS = 1622.04, Par. = 0 0 0 0 0 0 0 0 0 0 0 0
#> It. 1, RSS = 18.1131, Par. = -0.92853 0.590792 -0.0452606 0.629458 -0.52361 0.26631 -1.27108 -0.373017 -0.594539 -0.407316 -0.646637 -0.966524
#> It. 2, RSS = 12.9352, Par. = -1.23456 0.460783 -0.0701897 0.196413 -0.300864 0.03997 -1.0801 -0.363923 -0.652776 -0.179065 -0.230554 0.0378657
#> It. 3, RSS = 12.8861, Par. = -1.25334 0.458501 0.020703 0.123401 -0.280285 0.00272613 -1.07024 -0.359267 -0.689483 -0.221977 -0.0976082 -0.00740067
#> It. 4, RSS = 12.8853, Par. = -1.25988 0.461212 0.0263142 0.113366 -0.275931 0.00162186 -1.06702 -0.363682 -0.696376 -0.216871 -0.0922423 -0.00318999
#> It. 5, RSS = 12.8853, Par. = -1.25988 0.461215 0.0263632 0.11343 -0.275896 0.00377413 -1.06702 -0.363685 -0.696385 -0.216863 -0.0921115 -0.0028257
#> It. 6, RSS = 12.8853, Par. = -1.25989 0.461225 0.0264735 0.113505 -0.275862 0.0028931 -1.06702 -0.363692 -0.696408 -0.216869 -0.0918255 -0.00305245
#> It. 7, RSS = 12.8853, Par. = -1.2599 0.461231 0.0265137 0.113583 -0.275826 0.00184796 -1.06702 -0.363696 -0.696421 -0.216887 -0.0916078 -0.00300673
#> It. 8, RSS = 12.8853, Par. = -1.2599 0.461233 0.0265305 0.113604 -0.275821 0.00233049 -1.06702 -0.363697 -0.696425 -0.21689 -0.0915695 -0.00281314
#> It. 9, RSS = 12.8853, Par. = -1.2599 0.461233 0.0265305 0.113604 -0.275821 0.00233049 -1.06702 -0.363697 -0.696425 -0.21689 -0.0915695 -0.00281314
b <- growthfd.RegVelocities(model.bgs.m, fit$par, d$x[m])
#> Warning: the condition has length > 1 and only the first element will be used
#> Warning: the condition has length > 1 and only the first element will be used
#> Warning: the condition has length > 1 and only the first element will be used
#> Warning: the condition has length > 1 and only the first element will be used
#> Warning: the condition has length > 1 and only the first element will be used
#> Warning: the condition has length > 1 and only the first element will be used
#> Warning: the condition has length > 1 and only the first element will be used
#> Warning: the condition has length > 1 and only the first element will be used
p<- growthfd.plot.RegVelocities(b$population, b$individual)
x11()
p
